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STRINGSTRING
101249347 protein (Solanum lycopersicum) - STRING interaction network
"101249347" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101249347annotation not available (1292 aa)    
Predicted Functional Partners:
Solyc08g016090.2.1
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Basic helix-loop-helix, Nulp1-type (InterPro-IPR006994); Has 2929 Blast hits to 2464 proteins in 333 species- Archae - 2; Bacteria - 151; Metazoa - 913; Fungi - 372; Plants - 141; Viruses - 47; Other Eukaryotes - 1303 (so /.../NCBI BLink) (302 aa)
           
  0.873
cdc5
CDC5-like protein (987 aa)
     
 
  0.843
101260106
annotation not available (245 aa)
           
  0.783
101258982
annotation not available (238 aa)
           
  0.783
Solyc07g014700.2.1
annotation not available (650 aa)
           
  0.763
Solyc05g046330.2.1
annotation not available (746 aa)
           
  0.763
Solyc11g044230.1.1
Unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (96 aa)
           
  0.759
101055529
Hop-interacting protein THI111 (407 aa)
           
  0.758
101254901
annotation not available (509 aa)
           
  0.731
101255628
annotation not available (565 aa)
           
  0.731
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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