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STRINGSTRING
104646939 protein (Solanum lycopersicum) - STRING interaction network
"104646939" - VQ motif-containing protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
104646939VQ motif-containing protein (676 aa)    
Predicted Functional Partners:
Solyc12g088490.1.1
VQ motif-containing protein (162 aa)
           
  0.740
101250680
VQ motif-containing protein (168 aa)
           
  0.740
101248796
annotation not available (109 aa)
           
  0.658
101257285
annotation not available (233 aa)
           
  0.644
101266834
annotation not available (368 aa)
           
  0.644
101249467
VQ motif-containing protein (240 aa)
           
  0.644
101254158
annotation not available (263 aa)
           
  0.644
101262412
VQ motif-containing protein (323 aa)
           
  0.580
101249954
annotation not available (237 aa)
           
  0.554
Solyc09g008750.1.1
annotation not available (202 aa)
           
  0.554
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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