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101252980 protein (Solanum lycopersicum) - STRING interaction network
"101252980" - Unknown protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101252980Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species- Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (so /.../NCBI BLink) (242 aa)    
Predicted Functional Partners:
101244441
annotation not available (535 aa)
     
  0.988
101261422
annotation not available (535 aa)
     
  0.988
101248918
Uncharacterized protein; Coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family (459 aa)
     
  0.980
101251520
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast, chloroplast envelope; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 49 Blast hits to 49 protein /.../0 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source- NCBI BLink) (328 aa)
     
   
  0.934
101247221
Uncharacterized protein; NYC1-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family (346 aa)
     
 
  0.916
101247061
Uncharacterized protein; NAD(P)-binding Rossmann-fold superfamily protein (420 aa)
     
 
  0.912
Solyc09g014760.2.1
UbiA prenyltransferase family protein (408 aa)
     
 
    0.912
101248079
Uncharacterized protein; Light dependent NADH-protochlorophyllide oxidoreductase 1 (397 aa)
     
    0.904
101244717
Uncharacterized protein; Light dependent NADH-protochlorophyllide oxidoreductase 3 (395 aa)
     
    0.904
POR2
Uncharacterized protein; Light dependent NADH-protochlorophyllide oxidoreductase 2 (399 aa)
     
    0.904
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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