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Solyc04g064700.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g064700.2.1" - Transcription elongation factor SPT5 in Solanum lycopersicum
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Solyc04g064700.2.1Transcription elongation factor SPT5 (1040 aa)    
Predicted Functional Partners:
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
  0.991
Solyc04g008750.2.1
Transcription elongation factor SPT4 homolog ; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex (116 aa)
       
  0.986
RPE1
DNA-directed RNA polymerase V subunit 1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1678 aa)
     
  0.985
Solyc05g010300.2.1
Uncharacterized protein (319 aa)
     
  0.981
Solyc07g041510.1.1
Uncharacterized protein (697 aa)
     
  0.978
Solyc07g041550.2.1
Uncharacterized protein (415 aa)
     
  0.977
Solyc02g078580.1.1
Uncharacterized protein (645 aa)
     
  0.974
RPD1
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1206 aa)
     
  0.974
RPB1
DNA-directed RNA polymerase ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1846 aa)
     
  0.974
Solyc02g083240.2.1
Uncharacterized protein (115 aa)
     
  0.974
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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