STRINGSTRING
Solyc04g064820.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g064820.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g064820.2.1Uncharacterized protein (568 aa)    
Predicted Functional Partners:
Solyc09g075530.2.1
Uncharacterized protein (319 aa)
     
  0.975
Solyc01g100170.2.1
Uncharacterized protein (324 aa)
     
  0.975
Solyc05g013050.2.1
Uncharacterized protein (221 aa)
       
 
  0.969
Solyc03g115760.2.1
Uncharacterized protein (221 aa)
       
 
  0.969
Solyc08g067910.2.1
Uncharacterized protein (341 aa)
     
  0.961
Solyc07g054140.2.1
Uncharacterized protein (318 aa)
     
  0.961
Solyc11g066910.1.1
Uncharacterized protein (273 aa)
     
  0.954
Solyc08g076540.2.1
Uncharacterized protein (273 aa)
     
  0.954
Solyc06g062360.2.1
Uncharacterized protein (273 aa)
     
  0.954
Solyc08g005200.2.1
Uncharacterized protein (273 aa)
     
  0.950
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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