STRINGSTRING
CAS1 protein (Solanum lycopersicum) - STRING interaction network
"CAS1" - Cycloartenol synthase in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAS1Cycloartenol synthase (EC-5.4.99.8) (760 aa)    
Predicted Functional Partners:
Solyc10g080150.1.1
Methyltransferase (395 aa)
       
  0.970
Solyc01g087560.2.1
Methyltransferase (346 aa)
       
  0.970
bc2.1
Squalene epoxidase 3-like (EC-1.14.13.132) (463 aa)
   
 
  0.964
CYP51
Obtusifoliol 14alpha-demethylase (487 aa)
     
 
  0.850
Solyc08g079570.2.1
Uncharacterized protein (296 aa)
     
 
  0.823
Solyc06g076410.2.1
C-4 methyl sterol oxidase (269 aa)
     
 
  0.823
Solyc06g005750.2.1
Uncharacterized protein (265 aa)
     
 
  0.823
Solyc01g091320.2.1
Uncharacterized protein (300 aa)
     
 
  0.823
Solyc07g042630.2.1
Terpene cyclase/mutase family member (756 aa)
         
 
0.800
Solyc05g047580.2.1
Terpene cyclase/mutase family member (731 aa)
         
 
0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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