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STRINGSTRING
101264317 protein (Solanum lycopersicum) - STRING interaction network
"101264317" - Unknown protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101264317Unknown protein; Has 48 Blast hits to 48 proteins in 21 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source- NCBI BLink); Belongs to the complex I LYR family (91 aa)    
Predicted Functional Partners:
101261082
Uncharacterized protein; Formyltransferase, putative (360 aa)
           
  0.763
101262580
Uncharacterized protein; Titan9 (304 aa)
           
  0.743
101245092
Uncharacterized protein; Cell division cycle 48C (821 aa)
           
  0.695
101268863
annotation not available (643 aa)
           
  0.680
101252579
Octicosapeptide/Phox/Bem1p family protein (682 aa)
           
  0.680
Solyc00g009100.2.1
Nucleic acid-binding proteins superfamily (513 aa)
           
  0.678
101266715
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication (459 aa)
           
  0.658
Solyc08g067040.2.1
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (764 aa)
           
  0.657
101250937
annotation not available (587 aa)
           
  0.657
LOC543548
Dehydroquinate dehydratase/shikimate-NADP oxidoreductase (545 aa)
           
  0.653
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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