STRINGSTRING
Solyc04g071230.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g071230.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g071230.1.1Uncharacterized protein (174 aa)    
Predicted Functional Partners:
Solyc01g090450.2.1
Actin-related protein 2/3 complex subunit 5 ; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (132 aa)
       
  0.939
Solyc12g056770.1.1
Uncharacterized protein (256 aa)
     
 
  0.927
Solyc12g037980.1.1
Uncharacterized protein (435 aa)
       
0.925
Solyc07g007630.2.1
Arp2/3 complex 21 kDa subunit ; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (174 aa)
     
  0.924
Solyc02g014540.1.1
Arp2/3 complex 21 kDa subunit ; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (140 aa)
     
  0.924
Solyc02g094320.2.1
Uncharacterized protein (389 aa)
     
0.906
Solyc05g006470.2.1
Uncharacterized protein (375 aa)
     
  0.902
Solyc12g098430.1.1
Actin-related protein 2/3 complex subunit 4 ; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament (169 aa)
       
  0.897
Solyc03g007490.2.1
Uncharacterized protein (131 aa)
       
  0.897
Solyc12g094440.1.1
Uncharacterized protein (285 aa)
       
  0.893
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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