STRINGSTRING
Solyc04g071490.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g071490.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g071490.2.1Uncharacterized protein (325 aa)    
Predicted Functional Partners:
Solyc07g043560.2.1
Uncharacterized protein (890 aa)
   
 
  0.694
Solyc12g043120.1.1
Uncharacterized protein (846 aa)
   
 
  0.638
Solyc12g043110.1.1
Uncharacterized protein (852 aa)
   
 
  0.638
Solyc02g080470.2.1
Uncharacterized protein (753 aa)
   
 
  0.638
Solyc12g042560.1.1
Uncharacterized protein (210 aa)
   
 
  0.620
Solyc11g066100.1.1
Uncharacterized protein (654 aa)
   
 
  0.620
Solyc11g066060.1.1
Heat shock protein 70-2 (698 aa)
   
 
  0.620
HSC-2
Heat shock cognate 70 kDa protein 2 (644 aa)
   
 
  0.620
Solyc09g075950.1.1
Uncharacterized protein (576 aa)
   
 
  0.620
Solyc09g010630.2.1
Uncharacterized protein (649 aa)
   
 
  0.620
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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