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STRINGSTRING
104647135 protein (Solanum lycopersicum) - STRING interaction network
"104647135" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
104647135annotation not available (129 aa)    
Predicted Functional Partners:
101256471
Dentin sialophosphoprotein-related (1229 aa)
           
  0.618
fdh
Formate dehydrogenase, mitochondrial; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Involved in the cell stress response; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily (381 aa)
           
  0.607
101243918
Uncharacterized protein; ATP-dependent caseinolytic (Clp) protease/crotonase family protein; Belongs to the enoyl-CoA hydratase/isomerase family (311 aa)
           
  0.569
101251539
annotation not available (270 aa)
           
  0.558
101251245
annotation not available (270 aa)
           
  0.558
Solyc08g044270.2.1
annotation not available (233 aa)
           
  0.523
Solyc04g076930.1.1
annotation not available (130 aa)
           
  0.523
Solyc03g083440.2.1
annotation not available (2226 aa)
           
  0.523
101248249
annotation not available (202 aa)
           
  0.523
101247971
annotation not available (164 aa)
           
  0.523
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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