STRINGSTRING
Solyc04g071990.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g071990.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g071990.2.1Uncharacterized protein (1167 aa)    
Predicted Functional Partners:
Solyc07g017750.2.1
Uncharacterized protein (551 aa)
       
  0.931
Solyc01g005300.2.1
Uncharacterized protein (607 aa)
       
  0.931
Solyc06g069690.2.1
Uncharacterized protein (502 aa)
       
  0.917
Solyc03g115770.2.1
Uncharacterized protein (552 aa)
       
  0.917
Solyc12g095900.1.1
Uncharacterized protein (722 aa)
       
  0.908
Solyc11g070100.1.1
Uncharacterized protein (603 aa)
       
  0.908
Solyc08g065870.2.1
Uncharacterized protein (644 aa)
       
  0.908
Solyc06g062480.2.1
Uncharacterized protein (602 aa)
       
  0.908
COP1
COP1 homolog (677 aa)
       
  0.893
Solyc11g011980.1.1
Uncharacterized protein (672 aa)
       
  0.879
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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