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Solyc04g072510.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g072510.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g072510.2.1annotation not available (387 aa)    
Predicted Functional Partners:
101256124
Ribosomal protein L1p/L10e family; Belongs to the universal ribosomal protein uL1 family (338 aa)
     
      0.433
101254999
Plastid-specific ribosomal protein 4 (121 aa)
     
      0.426
101261139
Chloroplast 30S ribosomal protein S20, putative (184 aa)
     
      0.426
101250331
Ribosomal L5P family protein (265 aa)
     
      0.422
101249844
Uncharacterized protein; Translation elongation factor EF1B/ribosomal protein S6 family protein (196 aa)
     
      0.422
101255964
Ribosomal protein PSRP-3/Ycf65 (176 aa)
     
      0.421
101258785
Uncharacterized protein; Ribosomal L28 family (149 aa)
     
      0.416
101246627
Plastid-specific 50S ribosomal protein 6 (111 aa)
     
      0.415
101256669
annotation not available (229 aa)
     
      0.413
101245942
Ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family (129 aa)
     
      0.413
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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