STRINGSTRING
SERK1 protein (Solanum lycopersicum) - STRING interaction network
"SERK1" - Somatic embryogenesis receptor kinase 1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERK1Somatic embryogenesis receptor kinase 1 (629 aa)    
Predicted Functional Partners:
CURL3
Brassinosteroid LRR receptor kinase ; Receptor with a serine/threonine-protein kinase activity. Regulates, in response to brassinosteroid binding, a signaling cascade involved in plant development, including expression of light- and stress-regulated genes, promotion of cell elongation, normal leaf and chloroplast senescence, and flowering. May be involved in a feedback regulation of brassinosteroid biosynthesis. May be also involved in the perception of systemin, a peptide hormone responsible for the systemic activation of defense genes in leaves of wounded plants (By similarity) (1207 aa)
       
 
0.913
Solyc01g079720.2.1
Uncharacterized protein (597 aa)
       
 
  0.776
Solyc07g063000.2.1
Uncharacterized protein (1017 aa)
     
   
0.772
Solyc01g008140.2.1
Uncharacterized protein (967 aa)
     
   
0.772
Solyc04g077970.2.1
Uncharacterized protein (266 aa)
           
  0.699
AAP3
Amino acid transporter (476 aa)
           
  0.691
Solyc05g010000.1.1
Uncharacterized protein (101 aa)
       
      0.624
Solyc09g064520.2.1
Uncharacterized protein (1020 aa)
       
 
0.451
Solyc05g051640.2.1
Non-specific serine/threonine protein kinase (1012 aa)
       
   
0.451
Solyc04g050170.2.1
Uncharacterized protein (1012 aa)
       
   
0.451
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (13%) [HD]