STRINGSTRING
Solyc04g072670.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g072670.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g072670.2.1Uncharacterized protein (760 aa)    
Predicted Functional Partners:
Solyc05g047690.2.1
Uncharacterized protein (156 aa)
       
  0.984
Solyc11g009090.1.1
Uncharacterized protein (219 aa)
       
 
  0.899
Solyc10g047360.1.1
Uncharacterized protein (196 aa)
       
 
  0.899
Solyc03g094090.2.1
Uncharacterized protein (105 aa)
       
 
  0.899
Solyc03g094080.2.1
Uncharacterized protein (159 aa)
       
 
  0.899
Solyc03g094060.2.1
Uncharacterized protein (295 aa)
       
 
  0.899
Solyc03g094040.2.1
Uncharacterized protein (153 aa)
       
 
  0.899
Solyc10g008800.2.1
Uncharacterized protein (556 aa)
     
 
  0.752
Solyc10g007150.2.1
Uncharacterized protein (550 aa)
     
 
  0.752
Solyc08g074440.2.1
Uncharacterized protein (639 aa)
     
      0.725
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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