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STRINGSTRING
Solyc04g072760.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g072760.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g072760.2.1annotation not available (644 aa)    
Predicted Functional Partners:
Sn2
Snakin-2 (104 aa)
           
  0.631
101244415
annotation not available (325 aa)
     
 
  0.572
Solyc06g030510.2.1
annotation not available (117 aa)
           
  0.561
101254827
annotation not available (380 aa)
           
  0.531
101264242
annotation not available (675 aa)
           
  0.489
101249950
annotation not available (660 aa)
           
  0.489
101254617
annotation not available (386 aa)
     
 
  0.468
101249511
annotation not available (296 aa)
           
  0.465
101245125
annotation not available (307 aa)
           
  0.465
101248685
annotation not available (225 aa)
           
  0.461
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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