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101246529 protein (Solanum lycopersicum) - STRING interaction network
"101246529" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101246529Uncharacterized protein; tRNA modification GTPase, putative; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family (560 aa)    
Predicted Functional Partners:
101256323
Glucose-inhibited division family A protein (707 aa)
 
 
  0.945
101258352
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (288 aa)
   
   
  0.939
101243687
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G53250.1); Has 1136 Blast hits to 882 proteins in 242 species- Archae - 2; Bacteria - 216; Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other Eukaryotes - /.../ource- NCBI BLink) (617 aa)
     
        0.877
Solyc02g071280.2.1
16S rRNA processing protein RimM family (654 aa)
     
        0.862
Solyc12g006310.1.1
annotation not available (260 aa)
   
 
  0.780
101254614
annotation not available (481 aa)
   
 
  0.780
Solyc07g044810.2.1
annotation not available (339 aa)
   
 
  0.780
101249351
annotation not available (386 aa)
   
 
  0.780
101248429
annotation not available (386 aa)
   
 
  0.780
Solyc00g030520.2.1
annotation not available (241 aa)
   
 
  0.780
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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