STRINGSTRING
Solyc04g073940.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g073940.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g073940.2.1Uncharacterized protein (543 aa)    
Predicted Functional Partners:
Solyc02g062680.2.1
Anaphase-promoting complex subunit 10 ; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (191 aa)
     
  0.922
Solyc02g079050.2.1
Uncharacterized protein (769 aa)
     
  0.916
Solyc12g014320.1.1
Uncharacterized protein (551 aa)
     
  0.915
Solyc03g113740.2.1
Uncharacterized protein (576 aa)
     
  0.914
Solyc05g007750.2.1
Uncharacterized protein (883 aa)
     
  0.910
Solyc03g121020.2.1
Uncharacterized protein (698 aa)
     
  0.905
Solyc06g054080.2.1
Uncharacterized protein (393 aa)
     
  0.897
Solyc03g115240.2.1
Uncharacterized protein (622 aa)
     
  0.872
Solyc08g067190.2.1
Uncharacterized protein (967 aa)
     
  0.866
Solyc06g048460.1.1
Uncharacterized protein (835 aa)
     
  0.862
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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