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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101252482 protein (Solanum lycopersicum) - STRING interaction network
"101252482" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101252482annotation not available (211 aa)    
Predicted Functional Partners:
101262569
annotation not available (143 aa)
           
  0.669
101267967
annotation not available (818 aa)
           
  0.604
101246372
annotation not available (816 aa)
           
  0.604
100037730
FtsH-like protein (708 aa)
           
  0.581
Solyc05g007960.2.1
annotation not available (597 aa)
           
  0.566
Solyc04g045470.2.1
O-fucosyltransferase family protein (516 aa)
           
  0.566
Solyc03g077980.2.1
annotation not available (290 aa)
           
  0.566
Solyc03g077950.1.1
annotation not available (367 aa)
           
  0.566
101254702
annotation not available (737 aa)
           
  0.562
101268268
annotation not available (864 aa)
           
  0.562
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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