STRINGSTRING
Solyc04g074250.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g074250.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g074250.1.1Uncharacterized protein (1177 aa)    
Predicted Functional Partners:
Solyc06g084400.2.1
Uncharacterized protein (168 aa)
           
  0.491
Solyc11g073080.1.1
Uncharacterized protein (220 aa)
           
  0.489
MBD5
MBD5 (248 aa)
           
  0.489
Solyc05g047450.1.1
Uncharacterized protein (350 aa)
           
  0.489
Solyc11g005250.1.1
Uncharacterized protein (1376 aa)
           
  0.459
Solyc09g074670.2.1
Uncharacterized protein (1658 aa)
           
  0.459
Solyc08g079500.2.1
Uncharacterized protein (317 aa)
           
  0.459
Solyc01g067600.2.1
Uncharacterized protein (1650 aa)
           
  0.459
Solyc12g009590.1.1
Uncharacterized protein (434 aa)
           
  0.454
Solyc07g008170.2.1
Uncharacterized protein (339 aa)
           
  0.454
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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