• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc04g074250.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g074250.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g074250.1.1annotation not available (1177 aa)    
Predicted Functional Partners:
Solyc11g073080.1.1
Uncharacterized protein; methyl-CPG-binding domain 7 (220 aa)
           
  0.587
101249832
annotation not available (168 aa)
           
  0.582
MBD5
annotation not available (248 aa)
           
  0.548
Solyc10g018460.1.1
annotation not available (152 aa)
           
  0.408
Solyc07g015930.1.1
annotation not available (184 aa)
           
  0.408
Solyc05g047450.1.1
methyl-CPG-binding domain protein 02 (350 aa)
           
  0.408
101259218
annotation not available (434 aa)
           
  0.400
Solyc11g068910.1.1
annotation not available (371 aa)
           
  0.400
Solyc07g008170.2.1
annotation not available (339 aa)
           
  0.400
101262625
annotation not available (353 aa)
           
  0.400
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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