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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc04g074810.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g074810.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g074810.2.1annotation not available (355 aa)    
Predicted Functional Partners:
101245319
RING-type E3 ubiquitin transferase; Plant U-box 17 (724 aa)
           
  0.686
101252729
Uncharacterized protein; Cryptochrome-interacting basic-helix-loop-helix 1 (434 aa)
           
  0.627
101256754
Uncharacterized protein; Pentatricopeptide (PPR) repeat-containing protein (790 aa)
           
  0.619
101248972
annotation not available (272 aa)
           
  0.520
101257162
Uncharacterized protein; BIG PETAL P (227 aa)
           
  0.520
Solyc03g113560.2.1
annotation not available (102 aa)
           
  0.520
SlbHLH068
annotation not available (193 aa)
           
  0.499
101257620
annotation not available (250 aa)
           
  0.499
101251469
Uncharacterized protein; Basic helix-loop-helix (bHLH) DNA-binding superfamily protein (382 aa)
           
  0.465
101265216
Uncharacterized protein; HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain (775 aa)
           
  0.451
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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