STRINGSTRING
Solyc04g074830.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g074830.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g074830.1.1Uncharacterized protein (338 aa)    
Predicted Functional Partners:
Solyc07g045380.2.1
Uncharacterized protein (568 aa)
     
  0.901
Solyc06g051310.2.1
Clathrin heavy chain ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1701 aa)
     
  0.896
Solyc05g052510.2.1
Clathrin heavy chain ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1706 aa)
     
  0.896
Solyc03g096000.2.1
Clathrin heavy chain ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1702 aa)
     
  0.896
Solyc04g082560.2.1
Uncharacterized protein (1228 aa)
     
  0.856
Solyc02g082530.1.1
Uncharacterized protein (97 aa)
     
  0.854
Solyc00g007120.2.1
Annotation not available (750 aa)
     
  0.854
Solyc00g007110.2.1
Annotation not available (447 aa)
     
  0.854
Solyc11g066770.1.1
Uncharacterized protein (434 aa)
     
  0.834
Solyc11g066760.1.1
Uncharacterized protein (467 aa)
     
  0.834
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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