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101251280 protein (Solanum lycopersicum) - STRING interaction network
"101251280" - Cell division cycle protein 48-related / CDC48-related in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101251280Cell division cycle protein 48-related / CDC48-related (1194 aa)    
Predicted Functional Partners:
101267619
Uncharacterized protein; 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain (386 aa)
     
 
  0.855
Solyc07g006820.2.1
annotation not available (1823 aa)
     
 
  0.854
101257307
RNA helicase, ATP-dependent, SK12/DOB1 protein (991 aa)
   
        0.853
Solyc08g074520.1.1
annotation not available (656 aa)
     
      0.819
Solyc08g074510.1.1
annotation not available (176 aa)
     
      0.819
BTAF1
annotation not available (1268 aa)
     
      0.819
101255123
Protein kinase superfamily protein (1016 aa)
     
      0.792
101260036
Uncharacterized protein; INO80 ortholog (1539 aa)
     
      0.779
101249287
annotation not available (267 aa)
     
 
  0.750
Solyc07g062770.2.1
annotation not available (736 aa)
 
 
   
  0.740
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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