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STRINGSTRING
101257956 protein (Solanum lycopersicum) - STRING interaction network
"101257956" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101257956annotation not available (704 aa)    
Predicted Functional Partners:
101256240
Rab escort protein (552 aa)
     
 
  0.965
Solyc12g040810.1.1
annotation not available (288 aa)
     
 
  0.948
Solyc03g118570.2.1
annotation not available (286 aa)
     
 
  0.948
101263319
Prenyltransferase family protein (368 aa)
     
 
  0.946
FTB
Farnesyl-protein transferase beta subunit (457 aa)
     
 
  0.915
101264269
Unknown protein; Has 84 Blast hits to 64 proteins in 35 species- Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 29 (source- NCBI BLink) (1130 aa)
     
   
  0.838
101259410
annotation not available (444 aa)
     
 
  0.810
101261051
annotation not available (444 aa)
     
 
  0.810
GDI1
Guanosine nucleotide diphosphate dissociation inhibitor; Rab-GDP dissociation inhibitor ; Belongs to the Rab GDI family (445 aa)
     
 
  0.810
Rab1A
Small GTP-binding protein (203 aa)
       
 
  0.677
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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