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Solyc04g076580.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g076580.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g076580.2.1Uncharacterized protein; TBP-associated factor 7 (169 aa)    
Predicted Functional Partners:
Solyc07g006820.2.1
annotation not available (1823 aa)
     
 
  0.997
101262209
annotation not available (934 aa)
     
 
  0.993
101259036
Uncharacterized protein; TBP-associated factor 2 (1509 aa)
     
 
  0.991
101268876
Uncharacterized protein; TBP-associated factor 5 (685 aa)
     
 
  0.990
Solyc01g028930.2.1
annotation not available (203 aa)
     
 
  0.987
101254982
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription (138 aa)
     
 
  0.987
Solyc04g010090.2.1
TATA binding protein associated factor 21kDa subunit (161 aa)
     
 
  0.982
101253325
annotation not available (547 aa)
     
 
  0.964
101264035
annotation not available (560 aa)
     
 
  0.964
101263908
annotation not available (210 aa)
     
 
  0.962
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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