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STRINGSTRING
101261323 protein (Solanum lycopersicum) - STRING interaction network
"101261323" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101261323annotation not available (469 aa)    
Predicted Functional Partners:
101253164
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (786 aa)
     
 
  0.607
101266805
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (815 aa)
     
 
  0.607
Solyc02g030450.2.1
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (799 aa)
     
 
  0.607
101249150
Reticulon-like protein; 3-beta hydroxysteroid dehydrogenase/isomerase family protein (577 aa)
       
 
  0.486
101245464
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum (112 aa)
     
 
  0.468
101245632
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum (109 aa)
     
 
  0.468
101267960
Kinesin-like calmodulin-binding protein (ZWICHEL); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1265 aa)
       
 
  0.445
101261454
annotation not available (1124 aa)
           
  0.433
Solyc06g054650.2.1
annotation not available (400 aa)
       
 
  0.427
Solyc04g064810.2.1
annotation not available (367 aa)
       
 
  0.427
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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