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STRINGSTRING
Solyc04g076980.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g076980.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g076980.2.1annotation not available (239 aa)    
Predicted Functional Partners:
101266834
annotation not available (368 aa)
           
  0.583
101249782
Uncharacterized protein; Callose synthase 5 (1931 aa)
       
 
  0.570
101258371
annotation not available (344 aa)
           
  0.557
104649482
annotation not available (840 aa)
       
 
  0.493
Solyc09g015840.2.1
annotation not available (177 aa)
       
 
  0.493
MRLK1
MRLK1; Malectin/receptor-like protein kinase family protein (649 aa)
       
 
  0.493
Solyc07g063480.2.1
annotation not available (304 aa)
       
 
  0.493
Solyc10g054290.1.1
annotation not available (158 aa)
   
 
      0.477
101245643
annotation not available (528 aa)
       
 
  0.470
101243983
Eukaryotic aspartyl protease family protein; Belongs to the peptidase A1 family (537 aa)
       
 
  0.470
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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