STRINGSTRING
Solyc04g077030.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g077030.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g077030.2.1Uncharacterized protein (575 aa)    
Predicted Functional Partners:
Solyc07g006650.2.1
Xylose isomerase (398 aa)
 
   
  0.969
Solyc05g007260.2.1
Ribulose-phosphate 3-epimerase (216 aa)
       
  0.933
Solyc03g115820.2.1
Uncharacterized protein (282 aa)
       
  0.933
Solyc04g077040.2.1
Uncharacterized protein (559 aa)
   
   
 
0.801
Solyc06g035680.1.1
Uncharacterized protein (178 aa)
   
 
  0.747
SDH
Sorbitol related enzyme (355 aa)
   
 
  0.747
PRO2
Delta-1-pyrroline-5-carboxylate synthase Glutamate 5-kinase Gamma-glutamyl phosphate reductase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants (720 aa)
     
 
  0.724
Solyc06g019170.2.1
Uncharacterized protein (717 aa)
     
 
  0.724
Solyc07g063040.2.1
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 (508 aa)
       
  0.631
Solyc00g025530.1.1
Annotation not available (260 aa)
       
  0.631
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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