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STRINGSTRING
Solyc04g077030.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g077030.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g077030.2.1annotation not available (575 aa)    
Predicted Functional Partners:
Solyc05g007260.2.1
annotation not available (216 aa)
   
  0.961
101264109
Uncharacterized protein; D-ribulose-5-phosphate-3-epimerase (282 aa)
   
  0.961
Solyc07g006650.2.1
Xylose isomerase family protein (398 aa)
   
 
  0.949
101244576
annotation not available (559 aa)
   
   
 
0.801
101248625
annotation not available (309 aa)
   
 
  0.753
Solyc06g035680.1.1
annotation not available (178 aa)
 
 
  0.740
Solyc11g042950.1.1
annotation not available (92 aa)
           
  0.739
Solyc11g042940.1.1
annotation not available (298 aa)
           
  0.739
PRO2
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (720 aa)
     
 
  0.734
101244293
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (717 aa)
     
 
  0.734
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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