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Solyc04g077180.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g077180.1.1" - alpha/beta-Hydrolases superfamily protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g077180.1.1alpha/beta-Hydrolases superfamily protein (390 aa)    
Predicted Functional Partners:
101259376
Glutamine-rich protein 23 (974 aa)
           
  0.672
101257606
Uncharacterized protein; Zinc finger C-x8-C-x5-C-x3-H type family protein (785 aa)
           
  0.672
Solyc02g069080.2.1
BEST Arabidopsis thaliana protein match is- exocyst complex component 84B (TAIR-AT5G49830.1); Has 132 Blast hits to 132 proteins in 25 species- Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 117; Viruses - 0; Other Eukaryotes - 8 (source /.../ BLink) (774 aa)
           
  0.638
Solyc08g081590.1.1
Uncharacterized protein; Sporulation 11-2 (251 aa)
           
  0.580
101251582
annotation not available (311 aa)
       
 
  0.578
Solyc04g005820.2.1
annotation not available (320 aa)
       
 
  0.578
101244285
annotation not available (251 aa)
           
  0.577
101256548
annotation not available (919 aa)
     
 
  0.556
Solyc01g103130.1.1
annotation not available (607 aa)
     
 
  0.556
Solyc01g103120.2.1
annotation not available (295 aa)
     
 
  0.556
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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