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STRINGSTRING
101256087 protein (Solanum lycopersicum) - STRING interaction network
"101256087" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101256087annotation not available (809 aa)    
Predicted Functional Partners:
101258878
annotation not available (810 aa)
     
 
  0.993
101267297
ARM repeat superfamily protein (2149 aa)
     
 
  0.993
Solyc05g010480.2.1
Transducin family protein / WD-40 repeat family protein (396 aa)
     
 
  0.993
101246325
Transducin family protein / WD-40 repeat family protein (871 aa)
     
 
  0.993
Solyc10g080180.1.1
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (499 aa)
     
 
  0.993
Solyc03g120080.2.1
Periodic tryptophan protein 2 (666 aa)
     
 
  0.993
101254131
Transducin family protein / WD-40 repeat family protein (907 aa)
     
 
  0.993
101251902
Nucleotide binding;protein binding (452 aa)
     
 
  0.993
Solyc02g069770.2.1
annotation not available (516 aa)
     
 
  0.993
101257911
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- RNA processing; LOCATED IN- intracellular; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- RNA-processing protein, HAT helix (InterPro-IPR00310 /.../ small nucleolar RNA-associated protein 6 (InterPro-IPR013949); Has 492 Blast hits to 480 proteins in 206 species- Archae - 0; Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60; Viruses - 0; Other Eukaryotes - 111 (source- NCBI BLink) (652 aa)
     
 
  0.993
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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