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STRINGSTRING
Solyc04g077710.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g077710.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g077710.1.1annotation not available (343 aa)    
Predicted Functional Partners:
101245201
Ribosomal protein L17 ; Belongs to the universal ribosomal protein uL14 family (140 aa)
       
 
  0.494
Solyc09g072870.2.1
Ribosomal protein L17 (140 aa)
       
 
  0.494
l17
Ribosomal protein L17 (140 aa)
       
 
  0.494
Solyc10g054290.1.1
annotation not available (158 aa)
   
 
      0.472
Solyc07g062940.2.1
annotation not available (716 aa)
     
 
  0.459
101258039
annotation not available (364 aa)
   
          0.442
Solyc01g014130.1.1
annotation not available (113 aa)
   
          0.439
101254003
annotation not available (220 aa)
   
        0.438
Solyc10g051250.1.1
annotation not available (102 aa)
   
          0.435
Solyc01g014310.1.1
annotation not available (157 aa)
   
          0.435
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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