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STRINGSTRING
Solyc04g077730.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g077730.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g077730.1.1annotation not available (219 aa)    
Predicted Functional Partners:
101260123
Xanthine/uracil permease family protein (532 aa)
   
   
  0.777
101259342
Uncharacterized protein; AZA-guanine resistant1 (577 aa)
   
   
  0.773
100037732
Uricase; Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin; Belongs to the uricase family (307 aa)
   
   
  0.765
Solyc09g008550.2.1
Uncharacterized protein; Permease, cytosine/purines, uracil, thiamine, allantoin family protein (802 aa)
   
   
  0.745
cdkB1
B1-type cyclin dependent kinase ; Belongs to the protein kinase superfamily (303 aa)
           
  0.578
101258983
annotation not available (377 aa)
           
  0.542
Solyc08g077370.2.1
annotation not available (334 aa)
           
  0.542
101245097
annotation not available (364 aa)
           
  0.542
101263129
annotation not available (546 aa)
         
  0.530
cdkB2
B2-type cyclin dependent kinase ; Belongs to the protein kinase superfamily (315 aa)
           
  0.519
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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