STRINGSTRING
Solyc04g078610.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g078610.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g078610.2.1Uncharacterized protein (1031 aa)    
Predicted Functional Partners:
Solyc03g025470.2.1
Kinesin-like protein (668 aa)
     
0.906
Solyc02g080460.1.1
Uncharacterized protein (84 aa)
     
 
  0.805
Solyc07g053820.2.1
Uncharacterized protein (529 aa)
     
  0.735
Solyc06g051040.2.1
Uncharacterized protein (588 aa)
     
  0.735
Solyc05g014370.2.1
Uncharacterized protein (208 aa)
     
  0.732
Solyc09g090320.1.1
Kinesin-like protein (937 aa)
     
 
0.729
Solyc03g005620.2.1
Kinesin-like protein (769 aa)
     
 
0.729
Solyc09g010060.2.1
Uncharacterized protein (1007 aa)
     
 
0.724
Solyc11g072820.1.1
Uncharacterized protein (1052 aa)
     
 
0.723
Solyc10g086340.1.1
Uncharacterized protein (1044 aa)
     
 
0.723
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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