STRINGSTRING
Solyc04g078630.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g078630.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g078630.2.1Uncharacterized protein (450 aa)    
Predicted Functional Partners:
Solyc11g012290.1.1
Uncharacterized protein (359 aa)
           
  0.497
Solyc10g018590.1.1
Uncharacterized protein (206 aa)
           
  0.497
Solyc02g023990.2.1
Uncharacterized protein (308 aa)
           
  0.497
Solyc04g078560.1.1
Uncharacterized protein (384 aa)
           
  0.491
Solyc01g107790.2.1
Uncharacterized protein (394 aa)
           
  0.491
Solyc01g103850.2.1
Uncharacterized protein (330 aa)
           
  0.491
Solyc02g068750.1.1
Uncharacterized protein (346 aa)
           
  0.489
Solyc08g081330.2.1
Uncharacterized protein (356 aa)
           
  0.480
Solyc12g088660.1.1
Uncharacterized protein (238 aa)
           
  0.436
Solyc01g094500.2.1
Uncharacterized protein (439 aa)
           
  0.436
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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