STRINGSTRING
Solyc04g078640.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g078640.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g078640.1.1Uncharacterized protein (148 aa)    
Predicted Functional Partners:
T12
Homeobox protein knotted-1-like LET12 ; May have a role to play in formative events in ovule and embryo morphogenesis (431 aa)
           
  0.739
Solyc12g005680.1.1
Potassium transporter ; Potassium transporter (799 aa)
           
  0.483
Solyc12g005670.1.1
HAK5 ; Potassium transporter (786 aa)
           
  0.483
Solyc10g047270.1.1
Potassium transporter ; Potassium transporter (851 aa)
           
  0.483
Solyc09g074800.2.1
Potassium transporter ; Potassium transporter (759 aa)
           
  0.483
Solyc09g074790.1.1
Potassium transporter ; Potassium transporter (757 aa)
           
  0.483
Solyc06g050170.2.1
Potassium transporter ; Potassium transporter (984 aa)
           
  0.483
Solyc04g025990.2.1
Potassium transporter ; Potassium transporter (850 aa)
           
  0.483
Solyc03g097860.1.1
Potassium transporter ; Potassium transporter (782 aa)
           
  0.483
Solyc01g105150.2.1
Potassium transporter ; Potassium transporter (861 aa)
           
  0.483
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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