STRINGSTRING
Solyc04g078870.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g078870.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g078870.2.1Uncharacterized protein (528 aa)    
Predicted Functional Partners:
Solyc12g096060.1.1
Uncharacterized protein (215 aa)
     
  0.972
Solyc08g075960.2.1
Uncharacterized protein (215 aa)
     
  0.972
Solyc07g041730.2.1
Uncharacterized protein (215 aa)
     
  0.972
Solyc05g018300.2.1
Uncharacterized protein (1080 aa)
     
 
0.913
Solyc07g062940.2.1
Uncharacterized protein (716 aa)
     
0.903
Solyc05g012130.2.1
Uncharacterized protein (817 aa)
     
0.864
Solyc01g098980.2.1
Uncharacterized protein (1618 aa)
     
 
0.853
Solyc12g094560.1.1
Uncharacterized protein (801 aa)
     
  0.821
Solyc11g012340.1.1
Uncharacterized protein (378 aa)
     
  0.821
Solyc11g012330.1.1
Uncharacterized protein (286 aa)
     
  0.821
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (19%) [HD]