STRINGSTRING
dem protein (Solanum lycopersicum) - STRING interaction network
"dem" - Dem protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
demDem protein (644 aa)    
Predicted Functional Partners:
Solyc11g069000.1.1
Uncharacterized protein (526 aa)
     
      0.727
ureD
Putative urease accessory protein D (297 aa)
           
  0.693
FIE
Fertilization-independent endosperm protein (372 aa)
     
   
  0.691
LLP
LOV/LOV protein (398 aa)
           
  0.691
Solyc01g090750.2.1
Uncharacterized protein ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (545 aa)
     
 
  0.606
Solyc06g065520.2.1
Uncharacterized protein ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (558 aa)
     
      0.601
Solyc05g007440.2.1
Uncharacterized protein (341 aa)
       
      0.598
Solyc05g013990.2.1
Uncharacterized protein ; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (535 aa)
     
      0.480
Solyc04g045420.1.1
Uncharacterized protein (53 aa)
       
      0.472
Solyc04g045410.1.1
Uncharacterized protein (216 aa)
       
      0.472
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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