STRINGSTRING
Solyc04g079450.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g079450.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g079450.2.1Uncharacterized protein (220 aa)    
Predicted Functional Partners:
Solyc04g080880.2.1
Uncharacterized protein (845 aa)
       
  0.879
tdi-65
Low-temperature-induced cysteine proteinase (466 aa)
       
  0.858
Solyc04g078540.2.1
Uncharacterized protein (472 aa)
       
  0.858
Solyc02g076710.2.1
Uncharacterized protein (500 aa)
       
  0.858
Solyc02g076690.2.1
Uncharacterized protein (480 aa)
       
  0.858
Solyc01g107760.2.1
Uncharacterized protein (470 aa)
       
  0.858
Solyc11g032010.1.1
Uncharacterized protein (202 aa)
       
    0.614
Solyc01g100650.2.1
Uncharacterized protein (1077 aa)
       
    0.512
Solyc12g094700.1.1
Uncharacterized protein (331 aa)
       
  0.446
Solyc12g056020.1.1
Uncharacterized protein (341 aa)
       
  0.446
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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