STRINGSTRING
Solyc04g079820.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g079820.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g079820.2.1Uncharacterized protein (338 aa)    
Predicted Functional Partners:
Solyc05g056490.2.1
Uncharacterized protein (349 aa)
         
  0.907
Solyc10g076710.1.1
PI-phospholipase C PLC1 (601 aa)
     
 
  0.903
Solyc06g082000.2.1
PI-phospholipase C PLC6 (566 aa)
     
 
  0.903
PLC5
PI-phospholipase C PLC5 (593 aa)
     
 
  0.903
Solyc06g051620.2.1
PI-phospholipase C PLC2 (565 aa)
     
 
  0.903
Solyc06g007120.2.1
PI-phospholipase C PLC4 (587 aa)
     
 
  0.903
Solyc05g052760.2.1
PI-phospholipase C PLC3 (583 aa)
     
 
  0.903
Solyc12g088200.1.1
Inositol-tetrakisphosphate 1-kinase ; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 (336 aa)
         
  0.901
Solyc08g076690.1.1
Inositol-tetrakisphosphate 1-kinase ; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 (365 aa)
         
  0.901
Solyc08g005130.1.1
Inositol-tetrakisphosphate 1-kinase ; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 (349 aa)
         
  0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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