STRINGSTRING
Solyc04g080100.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g080100.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g080100.2.1Uncharacterized protein (496 aa)    
Predicted Functional Partners:
CYP51
Obtusifoliol 14alpha-demethylase (487 aa)
   
   
  0.671
CYP77A19
Cytochrome P450 7719 (511 aa)
   
     
  0.661
Solyc11g007980.1.1
Uncharacterized protein (508 aa)
   
     
  0.661
Solyc06g073570.2.1
Uncharacterized protein (543 aa)
   
     
  0.661
Solyc10g018150.1.1
Uncharacterized protein (524 aa)
   
     
  0.660
Solyc12g045020.1.1
Uncharacterized protein (493 aa)
   
     
  0.659
Solyc12g042480.1.1
Uncharacterized protein (496 aa)
   
     
  0.659
Solyc10g009390.2.1
Uncharacterized protein (556 aa)
   
     
  0.642
Solyc04g077440.2.1
Uncharacterized protein (525 aa)
     
 
  0.596
bc2.1
Squalene epoxidase 3-like (EC-1.14.13.132) (463 aa)
     
 
  0.596
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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