STRINGSTRING
Solyc04g080240.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g080240.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g080240.2.1Uncharacterized protein (1730 aa)    
Predicted Functional Partners:
Solyc12g008750.1.1
Uncharacterized protein (607 aa)
       
 
  0.549
Solyc09g090420.2.1
Uncharacterized protein (1105 aa)
       
 
  0.549
Solyc02g085570.2.1
BAC19.11 (558 aa)
       
 
  0.549
Solyc02g062920.2.1
Uncharacterized protein (560 aa)
       
 
  0.549
Solyc11g072590.1.1
Uncharacterized protein (1034 aa)
     
 
  0.402
Solyc06g071270.2.1
Putative uncharacterized protein (354 aa)
     
 
  0.402
Solyc06g005190.2.1
Uncharacterized protein (1019 aa)
     
 
  0.402
Solyc04g049840.2.1
Uncharacterized protein (861 aa)
     
 
  0.402
Solyc04g009510.2.1
Uncharacterized protein (911 aa)
     
 
  0.402
Solyc03g113700.2.1
Uncharacterized protein (348 aa)
     
 
  0.402
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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