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Solyc04g080630.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g080630.2.1" - 50S ribosomal protein L31 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g080630.2.150S ribosomal protein L31 (129 aa)    
Predicted Functional Partners:
Solyc00g026870.1.1
Annotation not available (465 aa)
   
  0.981
Solyc06g082760.2.1
Uncharacterized protein (203 aa)
   
  0.979
Solyc06g082750.2.1
Uncharacterized protein (203 aa)
   
  0.979
Solyc10g038060.1.1
Uncharacterized protein (145 aa)
   
  0.979
Solyc09g090410.2.1
Uncharacterized protein (149 aa)
   
  0.979
Solyc08g065760.2.1
Uncharacterized protein (211 aa)
   
  0.979
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
  0.979
Solyc00g026880.1.1
Annotation not available (88 aa)
   
  0.977
Solyc07g008270.2.1
Ribosomal protein (87 aa)
   
  0.976
Solyc12g014390.1.1
Uncharacterized protein (229 aa)
   
  0.974
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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