STRINGSTRING
Solyc04g080770.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g080770.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g080770.2.1Uncharacterized protein (547 aa)    
Predicted Functional Partners:
Solyc07g006000.2.1
50S ribosomal protein L35 (155 aa)
     
 
  0.816
Solyc00g026870.1.1
Annotation not available (465 aa)
   
 
  0.734
Solyc06g082760.2.1
Uncharacterized protein (203 aa)
     
 
  0.660
Solyc06g082750.2.1
Uncharacterized protein (203 aa)
     
 
  0.660
Solyc08g067950.2.1
Uncharacterized protein (160 aa)
       
 
  0.651
Solyc11g068820.1.1
Uncharacterized protein (206 aa)
     
      0.640
Solyc01g087730.2.1
Ribosomal protein (338 aa)
     
 
  0.637
Solyc12g013990.1.1
Uncharacterized protein (398 aa)
     
 
  0.633
Solyc04g009540.1.1
Uncharacterized protein (229 aa)
     
 
  0.626
Solyc11g068420.1.1
Ribosomal protein (216 aa)
       
 
  0.622
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (20%) [HD]