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Solyc04g080800.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g080800.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g080800.2.1Uncharacterized protein; Tetrapyrrole (Corrin/Porphyrin) Methylases (368 aa)    
Predicted Functional Partners:
Solyc12g096330.1.1
Uncharacterized protein; Methyltransferases (96 aa)
   
 
  0.715
Solyc01g106880.2.1
Uncharacterized protein; Methyltransferases (340 aa)
   
   
  0.699
101258352
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (288 aa)
         
  0.677
101259352
Ribosomal protein L11 methyltransferase-related (386 aa)
   
   
  0.617
101261082
Uncharacterized protein; Formyltransferase, putative (360 aa)
         
  0.610
101266581
mraW methylase family protein (438 aa)
   
   
  0.591
Solyc00g030210.1.1
annotation not available (1147 aa)
   
   
  0.590
101260604
rRNA adenine N(6)-methyltransferase; Ribosomal RNA adenine dimethylase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (386 aa)
         
  0.581
101247757
rRNA adenine N(6)-methyltransferase; Ribosomal RNA adenine dimethylase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (354 aa)
         
  0.581
Solyc01g091800.2.1
rRNA adenine N(6)-methyltransferase; Ribosomal RNA adenine dimethylase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (365 aa)
         
  0.581
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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