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Solyc04g080880.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g080880.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Solyc04g080880.2.1Uncharacterized protein; Xylem bark cysteine peptidase 3; Belongs to the peptidase C1 family (845 aa)    
Predicted Functional Partners:
101249702
annotation not available (414 aa)
     
 
  0.838
101248107
annotation not available (413 aa)
     
 
  0.838
101263286
annotation not available (211 aa)
     
        0.782
101253324
annotation not available (211 aa)
     
        0.782
Solyc07g056150.2.1
annotation not available (212 aa)
     
        0.782
THI1
Thiamine thiazole synthase, chloroplastic; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron-dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance (354 aa)
           
  0.760
Solyc04g079500.1.1
annotation not available (163 aa)
       
 
  0.744
Solyc04g079490.1.1
annotation not available (96 aa)
       
 
  0.744
101266216
annotation not available (416 aa)
       
 
  0.744
Solyc04g079470.2.1
annotation not available (390 aa)
       
 
  0.744
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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