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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101248772 protein (Solanum lycopersicum) - STRING interaction network
"101248772" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101248772annotation not available (408 aa)    
Predicted Functional Partners:
101249702
annotation not available (414 aa)
       
      0.824
101248107
annotation not available (413 aa)
       
      0.824
Solyc09g092740.2.1
annotation not available (161 aa)
       
 
  0.606
Solyc07g005070.1.1
annotation not available (351 aa)
       
 
  0.606
Solyc04g072390.2.1
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (353 aa)
           
  0.471
101265634
Uncharacterized protein; Oxidoreductase, 2OG-Fe(II) oxygenase family protein (354 aa)
           
  0.434
101265818
Ubiquitin interaction motif-containing protein (635 aa)
           
  0.431
Solyc11g008060.1.1
annotation not available (306 aa)
       
      0.412
Solyc11g008050.1.1
annotation not available (457 aa)
       
      0.412
Solyc11g008040.1.1
annotation not available (122 aa)
       
      0.412
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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