STRINGSTRING
Solyc04g081280.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g081280.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g081280.2.1Uncharacterized protein (1109 aa)    
Predicted Functional Partners:
Solyc09g010300.2.1
Uncharacterized protein (364 aa)
     
  0.972
Solyc06g074210.2.1
Uncharacterized protein (369 aa)
     
  0.972
Solyc01g009390.2.1
Uncharacterized protein (368 aa)
     
  0.972
Solyc05g056110.2.1
Uncharacterized protein (321 aa)
     
  0.971
Solyc08g077750.2.1
Uncharacterized protein (554 aa)
     
 
  0.963
Solyc09g009640.2.1
Uncharacterized protein (99 aa)
       
  0.860
Solyc12g017860.1.1
Uncharacterized protein (940 aa)
     
 
  0.847
Solyc05g047520.2.1
Uncharacterized protein (936 aa)
     
 
  0.847
Solyc01g103080.2.1
Uncharacterized protein (991 aa)
     
 
  0.847
Solyc10g078450.1.1
Uncharacterized protein (44 aa)
       
  0.843
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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