STRINGSTRING
Solyc04g081310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g081310.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g081310.2.1Uncharacterized protein (272 aa)    
Predicted Functional Partners:
Solyc08g062920.2.1
Elongation factor 2 (828 aa)
     
  0.739
Solyc08g062910.2.1
Elongation factor 2 (770 aa)
     
  0.735
Solyc01g098100.2.1
60S ribosome subunit biogenesis protein NIP7 homolog ; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (187 aa)
     
        0.728
Solyc10g083600.1.1
Uncharacterized protein (337 aa)
     
        0.719
Solyc10g081540.1.1
Uncharacterized protein (498 aa)
     
  0.674
Solyc06g066300.1.1
Uncharacterized protein (483 aa)
     
  0.674
Solyc12g008630.1.1
Uncharacterized protein (504 aa)
       
      0.598
Solyc05g026150.1.1
Uncharacterized protein (163 aa)
       
      0.598
Solyc12g062900.1.1
Uncharacterized protein (226 aa)
     
  0.570
Solyc08g079180.2.1
Uncharacterized protein (787 aa)
     
  0.570
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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