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STRINGSTRING
SPA protein (Solanum lycopersicum) - STRING interaction network
"SPA" - Protein SPA, chloroplastic in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPAProtein SPA, chloroplastic; Participates in determining harvest index (HI) by affecting source-sink carbon distribution. Up-regulates the conversion of fixed carbon to exportable sugars (159 aa)    
Predicted Functional Partners:
101256588
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast, chloroplast envelope; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; Has 49 Blast hits to 49 protein /.../0 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source- NCBI BLink) (226 aa)
     
 
  0.997
101257241
Uncharacterized protein; DnaJ/Hsp40 cysteine-rich domain superfamily protein (132 aa)
     
   
  0.986
LOC543930
Putative uncharacterized protein (238 aa)
     
   
  0.954
101267576
Rieske (2Fe-2S) domain-containing protein (276 aa)
     
   
  0.954
Solyc01g006130.2.1
Uncharacterized protein; DnaJ/Hsp40 cysteine-rich domain superfamily protein (228 aa)
     
   
  0.952
101259227
PsbP-like protein 1 (246 aa)
     
   
  0.948
101257480
Uncharacterized protein; Low PSII Accumulation 3 (382 aa)
     
   
  0.940
101258104
Thylakoid lumen 18.3 kDa protein (289 aa)
     
   
  0.936
Solyc08g006540.2.1
Peptidylprolyl isomerase; FK506-binding protein 13 (263 aa)
     
   
  0.935
101249229
Uncharacterized protein; Cyclophilin 38 (451 aa)
     
   
  0.933
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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