STRINGSTRING
SPA protein (Solanum lycopersicum) - STRING interaction network
"SPA" - Protein SPA in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPAProtein SPA; Participates in determining harvest index (HI) by affecting source-sink carbon distribution. Up-regulates the conversion of fixed carbon to exportable sugars (159 aa)    
Predicted Functional Partners:
ca2
Carbonic anhydrase ; Reversible hydration of carbon dioxide (321 aa)
     
   
  0.845
ca1
Carbonic anhydrase ; Reversible hydration of carbon dioxide (268 aa)
     
   
  0.703
ca3
Carbonic anhydrase ; Reversible hydration of carbon dioxide (255 aa)
     
   
  0.699
sbt3
Subtilisin-like protease (761 aa)
           
  0.699
Solyc05g014310.2.1
Uncharacterized protein (226 aa)
     
 
  0.696
ISPE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic ; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol (400 aa)
     
   
  0.696
Solyc02g086910.2.1
Uncharacterized protein (451 aa)
     
   
  0.574
Solyc06g066620.2.1
Uncharacterized protein (147 aa)
     
        0.561
Solyc12g009600.1.1
Uncharacterized protein (210 aa)
     
        0.508
Solyc01g098640.2.1
Uncharacterized protein (289 aa)
     
   
  0.497
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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