STRINGSTRING
Solyc04g081330.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g081330.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g081330.2.1Uncharacterized protein (210 aa)    
Predicted Functional Partners:
Solyc12g099270.1.1
Uncharacterized protein (407 aa)
   
          0.505
Solyc10g008020.2.1
Uncharacterized protein (381 aa)
   
          0.488
Solyc12g056960.1.1
Uncharacterized protein (516 aa)
   
          0.482
Solyc01g104320.2.1
Uncharacterized protein (284 aa)
   
          0.476
Solyc04g009700.2.1
Uncharacterized protein (255 aa)
   
          0.468
Solyc03g034170.2.1
Uncharacterized protein (285 aa)
   
        0.462
Solyc05g008270.2.1
Uncharacterized protein (413 aa)
   
          0.461
Solyc02g070800.2.1
Uncharacterized protein (306 aa)
   
          0.459
Solyc11g010350.1.1
Uncharacterized protein (446 aa)
   
          0.454
Solyc04g011900.2.1
Uncharacterized protein (330 aa)
   
        0.441
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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