STRINGSTRING
Solyc04g081350.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc04g081350.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc04g081350.2.1Uncharacterized protein (397 aa)    
Predicted Functional Partners:
RBR1
Retinoblastoma-related protein 1 (1018 aa)
     
  0.985
DP1
Transcription factor-like protein DPB (354 aa)
     
  0.983
Solyc09g010670.2.1
Uncharacterized protein (195 aa)
     
  0.981
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
       
      0.942
Solyc12g088530.1.1
Uncharacterized protein (354 aa)
     
  0.907
Solyc12g088520.1.1
Uncharacterized protein (355 aa)
     
  0.907
Solyc12g088500.1.1
Uncharacterized protein (354 aa)
     
  0.907
Solyc12g088470.1.1
Uncharacterized protein (360 aa)
     
  0.907
CycA1
Cyclin A1 (490 aa)
     
  0.907
CycA3
Cyclin A3 (378 aa)
     
  0.907
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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