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STRINGSTRING
101248386 protein (Solanum lycopersicum) - STRING interaction network
"101248386" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101248386Uncharacterized protein; Winged-helix DNA-binding transcription factor family protein (397 aa)    
Predicted Functional Partners:
101267947
Uncharacterized protein; Transcription factor DP (354 aa)
     
 
  0.998
RBR1
Retinoblastoma-related protein 1 (1018 aa)
     
 
  0.988
Solyc09g010670.2.1
Uncharacterized protein; Transcription factor DP (195 aa)
     
 
  0.987
101254991
annotation not available (364 aa)
     
 
  0.840
101267619
Uncharacterized protein; 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain (386 aa)
     
      0.813
101255925
Alba DNA/RNA-binding protein (165 aa)
       
      0.810
wee1
Protein kinase WEE1 (510 aa)
     
   
  0.777
101267504
annotation not available (504 aa)
     
 
  0.749
101251038
Uncharacterized protein; Class II aaRS and biotin synthetases superfamily protein (880 aa)
     
 
  0.749
Solyc02g091120.2.1
DNA LIGASE 6 (1473 aa)
     
        0.749
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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